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Cleaned occurrence records of the plant subfamily Bombacoideae (Malvaceae): the example dataset used in the README, the vignettes and the function examples, and the worked example of the biomes publication. The subfamily is a well-studied case of biome conservatism at the savanna-forest interface. The records were compiled and cleaned by Zizka et al. (2020) from GBIF, BIEN, speciesLink, RAINBIO and further sources.

Usage

bombacoideae_occurrences

Format

A data frame with 17,030 rows and 4 columns:

species

Scientific species name (185 species).

decimalLongitude

Decimal longitude in WGS84.

decimalLatitude

Decimal latitude in WGS84.

countryCode

ISO 3166-1 alpha-3 country code of the record.

Source

Zizka A, Carvalho-Sobrinho JG, Pennington RT, Queiroz LP, Alcantara S, Baum DA, Bacon CD, Antonelli A (2020) Transitions between biomes are common and directional in Bombacoideae (Malvaceae). Journal of Biogeography 47(6): 1310-1321. doi:10.1111/jbi.13815

Examples

data("bombacoideae_occurrences")
head(bombacoideae_occurrences)
#>                     species decimalLongitude decimalLatitude countryCode
#> 1 Cavanillesia platanifolia        -79.98333         -2.1500         ECU
#> 2    Cavanillesia umbellata        -70.25000        -12.0000         PER
#> 3    Cavanillesia umbellata        -78.63333         -4.5000         PER
#> 4    Cavanillesia umbellata        -76.46666         -2.8000         PER
#> 5    Cavanillesia umbellata        -69.10420        -12.0321         PER
#> 6    Cavanillesia umbellata        -74.30611        -11.1425         PER
length(unique(bombacoideae_occurrences$species))
#> [1] 185